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pauline-ng / SIFT4G_Create_Genomic_DB

Create genomic databases with SIFT predictions. Input is an organism's genomic DNA (.fa) file and the gene annotation file (.gtf). Output will be a database that can be used with SIFT4G_Annotator.jar to annotate VCF files.
GNU General Public License v3.0
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error #50

Closed BaHole closed 2 years ago

BaHole commented 2 years ago

H

pauline-ng commented 2 years ago

Your path is wrong?

It's :

perl make-SIFT-db-all.pl -c test_files/homo_sapiens-test.txt

The config file is set relative to the repo directory, if you're not in the right directory it's going to throw errors. You can always replace it with full paths.