For the annotation of Indel?

pauline-ng / SIFT4G_Create_Genomic_DB

Create genomic databases with SIFT predictions. Input is an organism's genomic DNA (.fa) file and the gene annotation file (.gtf). Output will be a database that can be used with SIFT4G_Annotator.jar to annotate VCF files.

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For the annotation of Indel? #67

Closed yilunhuangyue closed 2 years ago

yilunhuangyue commented 2 years ago

Hello, I have tried this tools and got teh result successfully. But I founf there was no prediction results for small any InDels. I wonder if this tool can predict the impact of Indels? Or any other recommanded tools?

Thank you very much for any help.

pauline-ng commented 2 years ago

The code for SIFT indel for humans can be found here