search

paulscherrerinstitute / alphafold-on-fire

GNU General Public License v3.0
1 stars 3 forks source link

Bump ruff from 0.1.14 to 0.1.15 in /backend #502

Closed dependabot[bot] closed 9 months ago

dependabot[bot] commented 10 months ago

Bumps ruff from 0.1.14 to 0.1.15.

Release notes

Sourced from ruff's releases.

v0.1.15

Changes

Preview features

  • Error when NURSERY selector is used with --preview (#9682)
  • Preserve indentation around multiline strings in formatter (#9637)
  • [flake8-return] Add fixes for all rules (RET505, RET506, RET507, RET508) (#9595)
  • [flake8-simplify] Add fix for if-with-same-arms (SIM114) (#9591)
  • [pycodestyle] Add fix for multiple-imports-on-one-line (E401) (#9518)
  • [pylint] Add fix for collapsible-else-if (PLR5501) (#9594)
  • [pylint] Add fix for useless-else-on-loop (PLW0120) (#9590)
  • [pylint] Implement assigning-non-slot (E0237) (#9623)
  • [pylint] Implement potential-index-error (PLE0643) (#9545)
  • [pylint] Implement too-many-nested-blocks (PLR1702) (#9172)
  • [ruff] Add rule to sort __slots__ and __match_args__ (#9564)
  • [ruff] Detect unnecessary dict comprehensions for iterables (RUF025) (#9613)
  • [ruff] Guard against use of default_factory as a keyword argument (RUF026) (#9651)
  • [ruff] Implement mutable-fromkeys-value (RUF024) (#9597)

CLI

  • Enable auto-wrapping of --help output (#9633)

Bug fixes

  • Avoid rendering display-only rules as fixable (#9649)
  • Detect automagic-like assignments in notebooks (#9653)
  • Generate custom JSON schema for dynamic setting (#9632)
  • [flake8-no-pep420] Include global --config when determining namespace packages (#9603)
  • [flake8-pie] Omit bound tuples passed to .startswith or .endswith (#9661)
  • [flake8-return] Avoid panic when fixing inlined else blocks (#9657)
  • [flake8-return] Consider exception suppression in unnecessary assignment (#9673)
  • [flake8-return] Take NoReturn annotation into account when analyzing implicit returns (#9636)
  • [flake8-simplify] Support inverted returns in needless-bool (SIM103) (#9619)
  • [flake8-type-checking] Add Pydantic's BaseConfig to default-copy list (#9650)
  • [flake8-type-checking] Avoid marking InitVar as a typing-only annotation (#9688)
  • [pycodestyle] Allow dtype comparisons in type-comparison (#9676)
  • [pydocstyle] Re-implement last-line-after-section (D413) (#9654)

Documentation

  • [flake8-pytest-style] Add fix safety documentation for duplicate-parameterize-test-cases (#9678)
  • [pylint] Document literal-membership fix safety conditions (#9677)
  • [isort] Fix reference to isort rule code (#9598)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.1.15

Preview features

  • Error when NURSERY selector is used with --preview (#9682)
  • Preserve indentation around multiline strings in formatter (#9637)
  • [flake8-return] Add fixes for all rules (RET505, RET506, RET507, RET508) (#9595)
  • [flake8-simplify] Add fix for if-with-same-arms (SIM114) (#9591)
  • [pycodestyle] Add fix for multiple-imports-on-one-line (E401) (#9518)
  • [pylint] Add fix for collapsible-else-if (PLR5501) (#9594)
  • [pylint] Add fix for useless-else-on-loop (PLW0120) (#9590)
  • [pylint] Implement assigning-non-slot (E0237) (#9623)
  • [pylint] Implement potential-index-error (PLE0643) (#9545)
  • [pylint] Implement too-many-nested-blocks (PLR1702) (#9172)
  • [ruff] Add rule to sort __slots__ and __match_args__ (#9564)
  • [ruff] Detect unnecessary dict comprehensions for iterables (RUF025) (#9613)
  • [ruff] Guard against use of default_factory as a keyword argument (RUF026) (#9651)
  • [ruff] Implement mutable-fromkeys-value (RUF024) (#9597)

CLI

  • Enable auto-wrapping of --help output (#9633)

Bug fixes

  • Avoid rendering display-only rules as fixable (#9649)
  • Detect automagic-like assignments in notebooks (#9653)
  • Generate custom JSON schema for dynamic setting (#9632)
  • [flake8-no-pep420] Include global --config when determining namespace packages (#9603)
  • [flake8-pie] Omit bound tuples passed to .startswith or .endswith (#9661)
  • [flake8-return] Avoid panic when fixing inlined else blocks (#9657)
  • [flake8-return] Consider exception suppression in unnecessary assignment (#9673)
  • [flake8-return] Take NoReturn annotation into account when analyzing implicit returns (#9636)
  • [flake8-simplify] Support inverted returns in needless-bool (SIM103) (#9619)
  • [flake8-type-checking] Add Pydantic's BaseConfig to default-copy list (#9650)
  • [flake8-type-checking] Avoid marking InitVar as a typing-only annotation (#9688)
  • [pycodestyle] Allow dtype comparisons in type-comparison (#9676)
  • [pydocstyle] Re-implement last-line-after-section (D413) (#9654)

Documentation

  • [flake8-pytest-style] Add fix safety documentation for duplicate-parameterize-test-cases (#9678)
  • [pylint] Document literal-membership fix safety conditions (#9677)
  • [isort] Fix reference to isort rule code (#9598)
Commits
  • a7755d7 Bump version to v0.1.15 (#9690)
  • 11449ac Avoid marking InitVar as a typing-only annotation (#9688)
  • 4ccbacd Error if the NURSERY selector is used with preview (#9682)
  • 05a2f52 Document literal-membership fix safety conditions (#9677)
  • a6f7100 [pycodestyle] Allow dtype comparisons in type-comparison (#9676)
  • 50122d2 [flake8-pytest-style] Add fix safety documentation for `duplicate-parameter...
  • ad2cfa3 [flake8-return] Consider exception suppress for unnecessary assignment (#9673)
  • 0045032 Set source type: Stub for black tests with options (#9674)
  • bea8f2e Detect automagic-like assignments in notebooks (#9653)
  • c8074b0 Bump serde_with from 3.5.0 to 3.5.1 (#9672)
  • Additional commits viewable in compare view


Dependabot compatibility score

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

Dependabot commands and options
You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore this major version` will close this PR and stop Dependabot creating any more for this major version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this minor version` will close this PR and stop Dependabot creating any more for this minor version (unless you reopen the PR or upgrade to it yourself) - `@dependabot ignore this dependency` will close this PR and stop Dependabot creating any more for this dependency (unless you reopen the PR or upgrade to it yourself)
github-actions[bot] commented 10 months ago

Overview

Image reference psisharedsharedchncr001.azurecr.io/alphafold:edge psisharedsharedchncr001.azurecr.io/alphafold:pr-502
- digest 35cc0232bf90 0dc519544162
- provenance https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/de3ef7709d4a18edecd940fd654063e7e3e5b6a6 https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/7a937b29b4accce6286bf06b4450e9db46b9c0f7
- vulnerabilities critical: 0 high: 1 medium: 1 low: 0 unspecified: 2 critical: 0 high: 1 medium: 0 low: 0
- platform linux/amd64 linux/amd64
- size 59 MB 67 MB (+8.4 MB)
- packages 110 110
Base Image python:3.10-alpine
also known as:
• 3.10-alpine3.19
• 3.10.13-alpine
• 3.10.13-alpine3.19		 python:3.10-alpine
also known as:
• 3.10-alpine3.19
• 3.10.13-alpine
• 3.10.13-alpine3.19
- vulnerabilities critical: 0 high: 0 medium: 2 low: 0 unspecified: 2 critical: 0 high: 0 medium: 1 low: 0
Environment Variables (2 changes) > * `±` 2 changed > * _8 unchanged_ ```diff GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D LANG=C.UTF-8 PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin PYTHON_GET_PIP_SHA256=7cfd4bdc4d475ea971f1c0710a5953bcc704d171f83c797b9529d9974502fcc6 PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/049c52c665e8c5fd1751f942316e0a5c777d304f/public/get-pip.py PYTHON_PIP_VERSION=23.0.1 PYTHON_SETUPTOOLS_VERSION=65.5.1 PYTHON_VERSION=3.10.13 -RELEASE_ID=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +RELEASE_ID=7a937b29b4accce6286bf06b4450e9db46b9c0f7 -VERSION=edge +VERSION=pr-502 ```
Labels (3 changes) > * `±` 3 changed > * _5 unchanged_ ```diff -org.opencontainers.image.created=2024-01-25T08:16:19.691Z +org.opencontainers.image.created=2024-01-30T14:13:56.965Z org.opencontainers.image.description= org.opencontainers.image.licenses=GPL-3.0 -org.opencontainers.image.revision=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +org.opencontainers.image.revision=7a937b29b4accce6286bf06b4450e9db46b9c0f7 org.opencontainers.image.source=https://github.com/paulscherrerinstitute/alphafold-on-fire org.opencontainers.image.title=alphafold-on-fire org.opencontainers.image.url=https://github.com/paulscherrerinstitute/alphafold-on-fire -org.opencontainers.image.version=edge +org.opencontainers.image.version=pr-502 ```
Packages and Vulnerabilities (6 package changes and 3 vulnerability changes) > * :infinity: 6 packages changed > * 104 packages unchanged > * :heavy_check_mark: 3 vulnerabilities removed
Changes for packages of type apk (6 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge		 Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-502
:infinity: .python-rundeps 20231209.013648 20240127.073042
:infinity: libcrypto3 3.1.4-r2 3.1.4-r5
:infinity: libssl3 3.1.4-r2 3.1.4-r5
:infinity: openssl 3.1.4-r2 3.1.4-r5
critical: 0 high: 0 medium: 1 low: 0 unspecified: 2
Removed vulnerabilities (3):
  • medium : CVE--2023--6129
  • unspecified : CVE--2024--0727
  • unspecified : CVE--2023--6237
:infinity: tzdata 2023c-r1 2023d-r0
:infinity: zlib 1.3-r2 1.3.1-r0
codecov[bot] commented 10 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (de3ef77) 100.00% compared to head (7a937b2) 100.00%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #502 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 7 7 Lines 105 105 ========================================= Hits 105 105 ``` | [Flag](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/502/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | Coverage Δ | | |---|---|---| | [backend](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/502/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | `100.00% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute#carryforward-flags-in-the-pull-request-comment) to find out more.

:umbrella: View full report in Codecov by Sentry.
:loudspeaker: Have feedback on the report? Share it here.

dependabot[bot] commented 9 months ago

Superseded by #507.