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paulscherrerinstitute / alphafold-on-fire

GNU General Public License v3.0
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Bump ruff from 0.1.14 to 0.2.1 in /backend #512

Closed dependabot[bot] closed 9 months ago

dependabot[bot] commented 9 months ago

Bumps ruff from 0.1.14 to 0.2.1.

Release notes

Sourced from ruff's releases.

v0.2.1

Changes

This release includes support for range formatting (i.e., the ability to format specific lines within a source file).

Preview features

  • [refurb] Implement missing-f-string-syntax (RUF027) (#9728)
  • Format module-level docstrings (#9725)

Formatter

  • Add --range option to ruff format (#9733)
  • Don't trim last empty line in docstrings (#9813)

Bug fixes

  • Skip empty lines when determining base indentation (#9795)
  • Drop __get__ and __set__ from unnecessary-dunder-call (#9791)
  • Respect generic Protocol in ellipsis removal (#9841)
  • Revert "Use publicly available Apple Silicon runners (#9726)" (#9834)

Performance

  • Skip LibCST parsing for standard dedent adjustments (#9769)
  • Remove CST-based fixer for C408 (#9822)
  • Add our own ignored-names abstractions (#9802)
  • Remove CST-based fixers for C400, C401, C410, and C418 (#9819)
  • Use AhoCorasick to speed up quote match (#9773)
  • Remove CST-based fixers for C405 and C409 (#9821)
  • Add fast-path for comment detection (#9808)
  • Invert order of checks in zero-sleep-call (#9766)
  • Short-circuit typing matches based on imports (#9800)
  • Run dunder method rule on methods directly (#9815)
  • Track top-level module imports in the semantic model (#9775)
  • Slight speed-up for lowercase and uppercase identifier checks (#9798)
  • Remove LibCST-based fixer for C403 (#9818)

Documentation

  • Update max-pos-args example to max-positional-args (#9797)
  • Fixed example code in weak_cryptographic_key.rs (#9774)
  • Fix references to deprecated ANN rules in changelog (#9771)
  • Fix default for max-positional-args (#9838)

Contributors

... (truncated)

Changelog

Sourced from ruff's changelog.

0.2.1

This release includes support for range formatting (i.e., the ability to format specific lines within a source file).

Preview features

  • [refurb] Implement missing-f-string-syntax (RUF027) (#9728)
  • Format module-level docstrings (#9725)

Formatter

  • Add --range option to ruff format (#9733)
  • Don't trim last empty line in docstrings (#9813)

Bug fixes

  • Skip empty lines when determining base indentation (#9795)
  • Drop __get__ and __set__ from unnecessary-dunder-call (#9791)
  • Respect generic Protocol in ellipsis removal (#9841)
  • Revert "Use publicly available Apple Silicon runners (#9726)" (#9834)

Performance

  • Skip LibCST parsing for standard dedent adjustments (#9769)
  • Remove CST-based fixer for C408 (#9822)
  • Add our own ignored-names abstractions (#9802)
  • Remove CST-based fixers for C400, C401, C410, and C418 (#9819)
  • Use AhoCorasick to speed up quote match (#9773)
  • Remove CST-based fixers for C405 and C409 (#9821)
  • Add fast-path for comment detection (#9808)
  • Invert order of checks in zero-sleep-call (#9766)
  • Short-circuit typing matches based on imports (#9800)
  • Run dunder method rule on methods directly (#9815)
  • Track top-level module imports in the semantic model (#9775)
  • Slight speed-up for lowercase and uppercase identifier checks (#9798)
  • Remove LibCST-based fixer for C403 (#9818)

Documentation

  • Update max-pos-args example to max-positional-args (#9797)
  • Fixed example code in weak_cryptographic_key.rs (#9774)
  • Fix references to deprecated ANN rules in changelog (#9771)
  • Fix default for max-positional-args (#9838)

0.2.0

Breaking changes

  • The NURSERY selector cannot be used anymore

... (truncated)

Commits


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github-actions[bot] commented 9 months ago

Overview

Image reference psisharedsharedchncr001.azurecr.io/alphafold:edge psisharedsharedchncr001.azurecr.io/alphafold:pr-512
- digest 35cc0232bf90 3d2253a99ee6
- provenance https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/de3ef7709d4a18edecd940fd654063e7e3e5b6a6 https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/a71095e17605c6e563c6cd5dd53ae1e3e2e4c911
- vulnerabilities critical: 0 high: 3 medium: 3 low: 0 unspecified: 1 critical: 0 high: 3 medium: 1 low: 0
- platform linux/amd64 linux/amd64
- size 59 MB 67 MB (+8.4 MB)
- packages 110 110
Base Image python:3.10-alpine
also known as:
• 3.10-alpine3.19
• 3.10.13-alpine
• 3.10.13-alpine3.19		 python:3.10-alpine
also known as:
• 3.10-alpine3.19
• 3.10.13-alpine
• 3.10.13-alpine3.19
- vulnerabilities critical: 0 high: 0 medium: 3 low: 0 unspecified: 1 critical: 0 high: 0 medium: 1 low: 0
Environment Variables (2 changes) > * `±` 2 changed > * _8 unchanged_ ```diff GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D LANG=C.UTF-8 PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin PYTHON_GET_PIP_SHA256=7cfd4bdc4d475ea971f1c0710a5953bcc704d171f83c797b9529d9974502fcc6 PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/049c52c665e8c5fd1751f942316e0a5c777d304f/public/get-pip.py PYTHON_PIP_VERSION=23.0.1 PYTHON_SETUPTOOLS_VERSION=65.5.1 PYTHON_VERSION=3.10.13 -RELEASE_ID=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +RELEASE_ID=a71095e17605c6e563c6cd5dd53ae1e3e2e4c911 -VERSION=edge +VERSION=pr-512 ```
Labels (3 changes) > * `±` 3 changed > * _5 unchanged_ ```diff -org.opencontainers.image.created=2024-01-25T08:16:19.691Z +org.opencontainers.image.created=2024-02-06T14:21:11.891Z org.opencontainers.image.description= org.opencontainers.image.licenses=GPL-3.0 -org.opencontainers.image.revision=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +org.opencontainers.image.revision=a71095e17605c6e563c6cd5dd53ae1e3e2e4c911 org.opencontainers.image.source=https://github.com/paulscherrerinstitute/alphafold-on-fire org.opencontainers.image.title=alphafold-on-fire org.opencontainers.image.url=https://github.com/paulscherrerinstitute/alphafold-on-fire -org.opencontainers.image.version=edge +org.opencontainers.image.version=pr-512 ```
Packages and Vulnerabilities (7 package changes and 3 vulnerability changes) > * :infinity: 7 packages changed > * 103 packages unchanged > * :heavy_check_mark: 3 vulnerabilities removed
Changes for packages of type apk (6 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge		 Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-512
:infinity: .python-rundeps 20231209.013648 20240127.073042
:infinity: libcrypto3 3.1.4-r2 3.1.4-r5
:infinity: libssl3 3.1.4-r2 3.1.4-r5
:infinity: openssl 3.1.4-r2 3.1.4-r5
critical: 0 high: 0 medium: 2 low: 0 unspecified: 1
Removed vulnerabilities (3):
  • medium : CVE--2023--6129
  • medium : CVE--2024--0727
  • unspecified : CVE--2023--6237
:infinity: tzdata 2023c-r1 2023d-r0
:infinity: zlib 1.3-r2 1.3.1-r0
Changes for packages of type pypi (1 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge		 Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-512
:infinity: pip 23.3.2 24.0
codecov[bot] commented 9 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Comparison is base (de3ef77) 100.00% compared to head (a71095e) 100.00%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #512 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 7 7 Lines 105 105 ========================================= Hits 105 105 ``` | [Flag](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/512/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | Coverage Δ | | |---|---|---| | [backend](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/512/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | `100.00% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute#carryforward-flags-in-the-pull-request-comment) to find out more.

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dependabot[bot] commented 9 months ago

Superseded by #521.