paulscherrerinstitute / alphafold-on-fire

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Bump pytest from 7.4.4 to 8.0.2 in /backend #526

Closed dependabot[bot] closed 8 months ago

dependabot[bot] commented 8 months ago

Bumps pytest from 7.4.4 to 8.0.2.

Release notes

Sourced from pytest's releases.

8.0.2

pytest 8.0.2 (2024-02-24)

Bug Fixes

  • #11895: Fix collection on Windows where initial paths contain the short version of a path (for example c:\PROGRA~1\tests).
  • #11953: Fix an IndexError crash raising from getstatementrange_ast.
  • #12021: Reverted a fix to [--maxfail]{.title-ref} handling in pytest 8.0.0 because it caused a regression in pytest-xdist whereby session fixture teardowns may get executed multiple times when the max-fails is reached.

8.0.1

pytest 8.0.1 (2024-02-16)

Bug Fixes

  • #11875: Correctly handle errors from getpass.getuser{.interpreted-text role="func"} in Python 3.13.
  • #11879: Fix an edge case where ExceptionInfo._stringify_exception could crash pytest.raises{.interpreted-text role="func"}.
  • #11906: Fix regression with pytest.warns{.interpreted-text role="func"} using custom warning subclasses which have more than one parameter in their [__init__]{.title-ref}.
  • #11907: Fix a regression in pytest 8.0.0 whereby calling pytest.skip{.interpreted-text role="func"} and similar control-flow exceptions within a pytest.warns(){.interpreted-text role="func"} block would get suppressed instead of propagating.
  • #11929: Fix a regression in pytest 8.0.0 whereby autouse fixtures defined in a module get ignored by the doctests in the module.
  • #11937: Fix a regression in pytest 8.0.0 whereby items would be collected in reverse order in some circumstances.

pytest 8.0.0 (2024-01-27)

See 8.0.0rc1 and 8.0.0rc2 for the full changes since pytest 7.4!

Bug Fixes

  • #11842: Properly escape the reason of a skip <pytest.mark.skip ref>{.interpreted-text role="ref"} mark when writing JUnit XML files.
  • #11861: Avoid microsecond exceeds 1_000_000 when using log-date-format with %f specifier, which might cause the test suite to crash.

8.0.0rc2

pytest 8.0.0rc2 (2024-01-17)

Improvements

  • #11233: Improvements to -r for xfailures and xpasses:
    • Report tracebacks for xfailures when -rx is set.
    • Report captured output for xpasses when -rX is set.
    • For xpasses, add - in summary between test name and reason, to match how xfail is displayed.
  • #11825: The pytest_plugin_registered{.interpreted-text role="hook"} hook has a new plugin_name parameter containing the name by which plugin is registered.

Bug Fixes

  • #11706: Fix reporting of teardown errors in higher-scoped fixtures when using [--maxfail]{.title-ref} or [--stepwise]{.title-ref}.

... (truncated)

Commits
  • 31afeeb Prepare release version 8.0.2
  • 1b00a2f Merge pull request #12025 from pytest-dev/backport-12022-to-8.0.x
  • ff2f66d [8.0.x] Revert "Fix teardown error reporting when --maxfail=1 (#11721)"
  • 8a8eed6 [8.0.x] Fix collection of short paths on Windows (#12024)
  • 74346f0 [8.0.x] Allow Sphinx 7.x (#12005)
  • b7657b4 [8.0.x] Disallow Sphinx 6 and 7 (#12001)
  • feb7c5e Merge pull request #11999 from pytest-dev/backport-11996-to-8.0.x
  • 0909655 [8.0.x] code: fix IndexError crash in getstatementrange_ast
  • 68524d4 Merge pull request #11993 from pytest-dev/release-8.0.1
  • d7d320a Prepare release version 8.0.1
  • Additional commits viewable in compare view


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github-actions[bot] commented 8 months ago

Overview

Image reference psisharedsharedchncr001.azurecr.io/alphafold:edge psisharedsharedchncr001.azurecr.io/alphafold:pr-526
- digest 35cc0232bf90 c15a3b97d229
- provenance https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/de3ef7709d4a18edecd940fd654063e7e3e5b6a6 https://github.com/paulscherrerinstitute/alphafold-on-fire/commit/cd8834e3f410233c360cf1d86d2997bdc014bbc8
- vulnerabilities critical: 0 high: 6 medium: 4 low: 0 unspecified: 1 critical: 0 high: 6 medium: 2 low: 0
- platform linux/amd64 linux/amd64
- size 59 MB 67 MB (+8.4 MB)
- packages 110 110
Base Image python:3.10-alpine
also known as:
3.10-alpine3.19
3.10.13-alpine
3.10.13-alpine3.19
python:3.10-alpine
also known as:
3.10-alpine3.19
3.10.13-alpine
3.10.13-alpine3.19
- vulnerabilities critical: 0 high: 1 medium: 4 low: 0 unspecified: 1 critical: 0 high: 1 medium: 2 low: 0
Environment Variables (4 changes) > * `±` 4 changed > * _6 unchanged_ ```diff GPG_KEY=A035C8C19219BA821ECEA86B64E628F8D684696D LANG=C.UTF-8 PATH=/usr/local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin -PYTHON_GET_PIP_SHA256=7cfd4bdc4d475ea971f1c0710a5953bcc704d171f83c797b9529d9974502fcc6 +PYTHON_GET_PIP_SHA256=dfe9fd5c28dc98b5ac17979a953ea550cec37ae1b47a5116007395bfacff2ab9 -PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/049c52c665e8c5fd1751f942316e0a5c777d304f/public/get-pip.py +PYTHON_GET_PIP_URL=https://github.com/pypa/get-pip/raw/dbf0c85f76fb6e1ab42aa672ffca6f0a675d9ee4/public/get-pip.py PYTHON_PIP_VERSION=23.0.1 PYTHON_SETUPTOOLS_VERSION=65.5.1 PYTHON_VERSION=3.10.13 -RELEASE_ID=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +RELEASE_ID=cd8834e3f410233c360cf1d86d2997bdc014bbc8 -VERSION=edge +VERSION=pr-526 ```
Labels (3 changes) > * `±` 3 changed > * _5 unchanged_ ```diff -org.opencontainers.image.created=2024-01-25T08:16:19.691Z +org.opencontainers.image.created=2024-02-26T14:47:34.294Z org.opencontainers.image.description= org.opencontainers.image.licenses=GPL-3.0 -org.opencontainers.image.revision=de3ef7709d4a18edecd940fd654063e7e3e5b6a6 +org.opencontainers.image.revision=cd8834e3f410233c360cf1d86d2997bdc014bbc8 org.opencontainers.image.source=https://github.com/paulscherrerinstitute/alphafold-on-fire org.opencontainers.image.title=alphafold-on-fire org.opencontainers.image.url=https://github.com/paulscherrerinstitute/alphafold-on-fire -org.opencontainers.image.version=edge +org.opencontainers.image.version=pr-526 ```
Packages and Vulnerabilities (7 package changes and 2 vulnerability changes) > * :infinity: 7 packages changed > * 103 packages unchanged > * :heavy_check_mark: 2 vulnerabilities removed
Changes for packages of type apk (6 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge
Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-526
:infinity: .python-rundeps 20231209.013648 20240127.073042
:infinity: libcrypto3 3.1.4-r2 3.1.4-r5
:infinity: libssl3 3.1.4-r2 3.1.4-r5
:infinity: openssl 3.1.4-r2 3.1.4-r5
critical: 0 high: 0 medium: 2 low: 0 unspecified: 1
Removed vulnerabilities (3):
  • medium : CVE--2023--6129
  • medium : CVE--2024--0727
  • unspecified : CVE--2023--6237
:infinity: tzdata 2023c-r1 2023d-r0
:infinity: zlib 1.3-r2 1.3.1-r0
Changes for packages of type pypi (1 changes)
Package Version
psisharedsharedchncr001.azurecr.io/alphafold:edge
Version
psisharedsharedchncr001.azurecr.io/alphafold:pr-526
:infinity: pip 23.3.2 24.0
codecov[bot] commented 8 months ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 100.00%. Comparing base (de3ef77) to head (cd8834e).

Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #526 +/- ## ========================================= Coverage 100.00% 100.00% ========================================= Files 7 7 Lines 105 105 ========================================= Hits 105 105 ``` | [Flag](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/526/flags?src=pr&el=flags&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | Coverage Δ | | |---|---|---| | [backend](https://app.codecov.io/gh/paulscherrerinstitute/alphafold-on-fire/pull/526/flags?src=pr&el=flag&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute) | `100.00% <ø> (ø)` | | Flags with carried forward coverage won't be shown. [Click here](https://docs.codecov.io/docs/carryforward-flags?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=paulscherrerinstitute#carryforward-flags-in-the-pull-request-comment) to find out more.

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dependabot[bot] commented 8 months ago

Superseded by #530.