Update downloads.tsv with permanent links - Githubissues

paulsengroup / 2022-mcf10a-cancer-progression

Data analysis code for: "Loss of multi-level 3D genome organization during breast cancer progression" (preprint available soon)

MIT License

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Update downloads.tsv with permanent links #110

Open robomics opened 1 month ago

robomics commented 1 month ago

Part one is done: https://github.com/paulsengroup/2022-mcf10a-cancer-progression/commit/37ec1df63c7e80081f75c06cf2c21f30524ed030 We still need to add links to our own datasets:

RNA-seq: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE246689
ChIP-seq (Lamin1): https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE246599
ChIP-seq (reanalysis): https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE247171
Hi-C: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE246947