paulstothard / cgview_comparison_tool

The CGView Comparison Tool (CCT) is a package for visually comparing bacterial, plasmid, chloroplast, and mitochondrial sequences.
https://paulstothard.github.io/cgview_comparison_tool/
GNU General Public License v3.0
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Multipe genome comparision not being done #7

Closed dikshyantg closed 3 years ago

dikshyantg commented 3 years ago

I have tried to run cgview on multiple genome by putting those multiple genome into comaprison_genomes folder, however I always get the comparison done vs the first genome file not with the others. I have three genomes .gbk files in that folder as shown in the image bu the comparision is being done with just one of them.

Screen Shot 2021-04-12 at 8 46 44 AM
paulstothard commented 3 years ago

I suspect that the two files that aren't processed have issues with the feature table or are missing CDS features, but I'm not certain. If you provide one or both files I will look into the issue further.

dikshyantg commented 3 years ago

I checked it a while ago and the issue was with the gbk files. Thanks!