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pblischak / HyDe

Hybridization detection using phylogenetic invariants
http://hybridization-detection.readthedocs.io
GNU General Public License v3.0
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fileSegmentation fault (core dumping) #28

Open gyq-123 opened 1 year ago

gyq-123 commented 1 year ago

Hi This "fileSegmentation fault (core dumping)" occurred while running run_hyde.py. Is this because the input data exceeds the limit?

pblischak commented 1 year ago

There are a few things that can cause segmentation faults when running HyDe. How big are your input files?

Most of the time segmentation faults are caused by the ordering of individuals/taxa in the map and in the Phylip file not being in agreement. Empty lines in the input files can also cause segmentation faults