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pboutinaud / SHiVAi

The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
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Support Voxel Sizes? #1

Open jinbyeong opened 5 days ago

jinbyeong commented 5 days ago

Hello, thank you for your excellent work and research.

Could you please let me know the range of voxel sizes that this preprocessing process supports? In my case, I have T1 images with sizes of 1024x1024x175 and 512x512x208.

Thank you!

VN-Fealinx commented 4 days ago

Hi, The preprocessing will always re-sample the input to 1x1x1mm^3 isotropic (what the AI segmentation algorithm is expecting). So whatever the input (as long as the resolution is not too low) it should work. We haven't tested with the specific image sizes that you are asking about, but I think it should work. Let us know if you have any problem :) Cheers, Victor