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pbs-assess
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sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
https://pbs-assess.github.io/sdmTMB/
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Issue # 184
#190
ericward-noaa
closed
1 year ago
1
Indices of random effects (RE) in stan output for mixture models like beta_gamma model
#187
xsswang
closed
1 year ago
1
Check poisson-link delta models
#186
seananderson
closed
1 year ago
1
Submit update to CRAN soon because of bug in printing sigma_E with delta models
#185
seananderson
closed
10 months ago
0
Fix handling of factors
#184
ericward-noaa
closed
1 year ago
4
Use additional Newton optimization by default
#182
seananderson
closed
1 year ago
0
`print()` should check `sanity()` and warn if something looks off
#176
seananderson
closed
1 year ago
0
Allow standard errors on overall predictions from delta models
#174
seananderson
closed
1 year ago
1
Visreg Error: Specified time column is missing from data
#172
seananderson
closed
1 year ago
4
Warn in `make_mesh()` if a mesh looks overly complex
#170
seananderson
closed
1 year ago
0
Release sdmTMB 0.3.0
#169
seananderson
closed
1 year ago
0
Add sub-regions to get_index()
#166
ericward-noaa
closed
1 year ago
2
sdmTMB_cv: object not found w/ offset
#165
CamFreshwater
closed
1 year ago
4
Release sdmTMB 0.2.2
#164
seananderson
closed
1 year ago
0
Add error message to predict() when `re_form_iid` is not specified but new levels in newdata
#163
seananderson
closed
1 year ago
0
Recognize time as non-numeric?
#162
ericward-noaa
closed
1 year ago
4
combined predictions from delta/hurdle model not working as described
#160
ecophilina
closed
1 year ago
2
Add variable meshes by time step
#159
ericward-noaa
opened
1 year ago
3
Fix 'Additional issues' CRAN checks
#158
seananderson
closed
1 year ago
4
Add anisotropy to model print()
#157
ecophilina
closed
1 year ago
0
Expand sdmTMB_cv to also include leave future out cross validation
#156
ericward-noaa
closed
1 year ago
0
Add LFOCV to cross validation sdmTMB_cv
#155
ericward-noaa
closed
1 year ago
0
Fix quadratic summary stats with delta models
#154
ericward-noaa
opened
1 year ago
0
class of `delta_*()` families is `"list"` not `"family"`
#153
kellijohnson-NOAA
closed
1 year ago
1
Add type of spatiotemporal field to print output
#152
seananderson
closed
10 months ago
1
Improve reporting of range with anisotropic models
#149
seananderson
closed
1 year ago
2
Develop wiki/vignette/chapter of user guide on mesh guidance
#148
seananderson
opened
1 year ago
0
Add Metabolic Index features
#147
jindivero
opened
1 year ago
0
Add std normal
#146
ericward-noaa
opened
1 year ago
4
Ece mixtures
#141
ericward-noaa
closed
1 year ago
5
predict(...., type= "response", se_fit = T) gives both est and se as link
#140
matteba
closed
1 year ago
5
Add 2 more tests: d() argument in t2, and factor smooths (bs = "fs")
#135
ericward-noaa
closed
1 year ago
1
Add AR(1) time-varying option, prediction with missing time, additional checks
#133
seananderson
closed
1 year ago
0
Detect random slopes or offset() and issue error or warning
#131
seananderson
closed
1 year ago
0
Allow prediction on new data with missing time elements
#130
matteba
closed
1 year ago
3
passing family as variable to sdmTMB_cv
#127
seanhardison1
closed
10 months ago
6
`Error when reading the variable: 'proj_mesh'` with TMB 1.9.1
#112
seananderson
closed
2 years ago
1
predict() function issues
#110
ericward-noaa
closed
1 year ago
3
Append threshold covariates to simulated data
#109
ericward-noaa
closed
10 months ago
1
Nonstationary and threshold models
#108
ericward-noaa
closed
2 years ago
3
predict with nsim > 0 fails with multiple spatially varying terms
#107
Ax3man
closed
2 years ago
2
issues with simple example
#106
nissandjac
closed
2 years ago
4
Add support for logit-normal distribution
#105
ericward-noaa
closed
10 months ago
2
Include functionality for age comp data?
#104
ericward-noaa
opened
2 years ago
0
Add ability to predict using stars data objects
#103
plthompson
closed
1 year ago
1
Add vignette on residuals / diagnostics
#102
ericward-noaa
opened
2 years ago
1
Add and document ggeffects ggpredict support
#101
seananderson
opened
2 years ago
6
`predict()` makes R session crash in dev branch when passing `newdata`
#100
kellijohnson-NOAA
closed
2 years ago
15
Visreg error
#99
gfmg
closed
2 years ago
3
Error in getUserDLL() : Multiple TMB models loaded. Failed to guess DLL name.
#98
gfmg
closed
2 years ago
6
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