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pcantalupo / annotater

Annotate sequences by BLAST using NCBI taxonomy information
MIT License
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Exception error when testing Taxonomy.t #3

Closed pcantalupo closed 6 years ago

pcantalupo commented 6 years ago

On a OSX 10.12.6, I ran prove -v Taxonomy.t and got this error:

------------- EXCEPTION: Bio::Root::Exception -------------
MSG: Response Error
Can't verify SSL peers without knowing which Certificate Authorities to trust
STACK: Error::throw
STACK: Bio::Root::Root::throw /Users/pgc92/local/lib/bioperl/bioperl-live/Bio/Root/Root.pm:447
STACK: Bio::DB::GenericWebAgent::get_Response /Users/pgc92/local/lib/bioperl/bioperl-live/Bio/DB/GenericWebAgent.pm:214
STACK: Bio::DB::EUtilities::get_Response /Users/pgc92/perl5/lib/perl5/Bio/DB/EUtilities.pm:35
STACK: Taxonomy::accession2gi /Users/pgc92/local/lib/annotater/Taxonomy.pm:169
STACK: Taxonomy.t:19
-----------------------------------------------------------
pcantalupo commented 6 years ago

Found the fix here I installed Mozilla::CA with cpanm Mozilla::CA. Taxonomy.t tests ran without error.