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pcm32 / galaxy-helm-charts

Deployment of Galaxy on Kubernetes through Helm Charts
MIT License
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I always have the errors when deploying k8s with minikube #6

Open jianlianggao opened 5 years ago

jianlianggao commented 5 years ago

Hi Pablo,

I used the latest helm repo to install local instance with the latest phenomenal k8s runtime. All pods have same errors like

Activating virtualenv at .venv
galaxy.tools.deps WARNING 2019-08-11 13:12:59,916 Path './database/dependencies' does not exist, ignoring
galaxy.tools.deps WARNING 2019-08-11 13:12:59,923 Path './database/dependencies' is not directory, ignoring
galaxy.tools.deps.installable WARNING 2019-08-11 13:13:00,399 Conda not installed and auto-installation disabled.
galaxy.tools.deps.installable WARNING 2019-08-11 13:13:00,401 Conda not installed and auto-installation disabled.
Executing: python ./scripts/paster.py serve "/galaxy/config/galaxy.ini"  --daemon --pid-file "galaxy.pid" --log-file "galaxy.log"
tail: cannot open 'paster.log' for reading: No such file or directory

Then the pods stop.

What's wrong?

Best wishes, Jianliang