search

pdtrang / MetaBIDx

A new computational tool to empowering bacteria identification in microbiomes
MIT License
1 stars 0 forks source link

MetaBIDX not running with large Illumina Nova Seq paired end FASTQ files #5

Open arpit20328 opened 5 months ago

arpit20328 commented 5 months ago

So I ran MetaBIDX with given test data reads ( _r1 and __r2) fastq with my build index. And it ran successfully

image

But when I ran MetaBIDX with my given Nova Seq Reads (which contain 121 M reads each) with the same index, It DID NOT RAN and the process was automatically killed

image

Kindly resolve the issue..

pdtrang commented 5 months ago

@arpit20328 how much memory do you have on your machine? what is the file size of each fastq?