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pemsley / coot

Software for macromolecular model-building
http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
GNU General Public License v3.0
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refmac5 failed #29

Closed bingwang14 closed 3 years ago

bingwang14 commented 3 years ago

Hi,

When I run a tutorial following "Coot Cryo-EM Tutorial 2: Fitting and Mutating", I met the error with warning info:"refmac5 failed". It happened when I started "Multi-sharpen using Refmac" from the Cryo-EM modules. Here is the specific error messages. usage: refmac_window.py [-h] [--args Arguments] [--args_string Arguments] [--job_location JOB_LOCATION] [--job_id JOB_ID] [--project_location PROJECT_LOCATION] [--gui] [--no-gui] refmac_window.py: error: unrecognized arguments: MAPIN EMD-3908/map/emd_3908.map (info-dialog "WARNING:: refmac5 failed")

Do you have any idea what is going on and how to fix it? Thank you.

Regards, Bing

pemsley commented 3 years ago

Hello Bing, I don't understand this. refmac_window.py is not part of Coot. I guess that the problem lies elsewhere. (The info-dialog is part of Coot though.)