Closed nsheff closed 4 years ago
How JK does something similar in snakemake:
https://github.com/snakemake-workflows/dna-seq-gatk-variant-calling/blob/master/rules/common.smk#L11
Also consider biocompute objects: https://github.com/biocompute-objects/BCO_Specification
How JK does something similar in snakemake:
https://github.com/snakemake-workflows/dna-seq-gatk-variant-calling/blob/master/rules/common.smk#L11