geofetch -i example_sample_list_2.tsv
Metadata folder: /home/nsheff/garage/geofetch/example_sample_list_2
Accession list file found: example_sample_list_2.tsv
Traceback (most recent call last):
File "/home/nsheff/.local/bin/geofetch", line 8, in <module>
sys.exit(main())
File "/home/nsheff/.local/lib/python3.8/site-packages/geofetch/geofetch.py", line 1591, in main
Geofetcher(args).fetch_all()
File "/home/nsheff/.local/lib/python3.8/site-packages/geofetch/geofetch.py", line 147, in fetch_all
acc_GSE_list = parse_accessions(
File "/home/nsheff/.local/lib/python3.8/site-packages/geofetch/utils.py", line 120, in parse_accessions
if acc_GSE_list.has_key(gse): # GSE already has a GSM; add the next one
AttributeError: 'dict' object has no attribute 'has_key'
Given example_sample_list_2.tsv like this:
I get this error: