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pepkit / looper

A job submitter for Portable Encapsulated Projects
http://looper.databio.org
BSD 2-Clause "Simplified" License
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Error with peppy #316

Closed nsheff closed 1 year ago

nsheff commented 3 years ago

Using dev version of looper and running refgenie builds, I get:

ImportError: cannot import name 'make_abs_via_cfg' from 'peppy.utils'

does it rely on a version of peppy that is not specified?

nsheff commented 3 years ago

I think just a reminder to update peppy requirement at release.

vreuter commented 1 year ago

@nsheff do you have an example of a refgenie build command which triggered this error? I'd like to at least test locally and perhaps also add a test that would fail now but then succeed with a version bump of the peppy dependency.

nsheff commented 1 year ago

Probably we should just make the next version of looper rely on the latest version of peppy, since we'll be making other changes, and then there's no need to track this down.

Since I ran into this 2 years ago, I am not sure if it's even a problem anymore.

vreuter commented 1 year ago

Closing in favor of #346