pepkit / looper

A job submitter for Portable Encapsulated Projects
http://looper.databio.org
BSD 2-Clause "Simplified" License
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clarify docs on variable namespaces #323

Closed nsheff closed 1 year ago

nsheff commented 3 years ago

http://looper.databio.org/en/latest/variable-namespaces/

in the looper namespace:

donaldcampbelljr commented 1 year ago

-Clarified the docs to show that the sample_output_folder will use either the sample or project name. -Also removed mention of the pipeline_config as it seems that it now uses pep_config. -Moved variables that are paths to be under the paths sections.

See commit: https://github.com/pepkit/looper/commit/b0e5918c49c4564a2eb637ae4c8d2f9fbfd35c72