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pepkit / looper

A job submitter for Portable Encapsulated Projects
http://looper.databio.org
BSD 2-Clause "Simplified" License
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Feature pydantic argparse cli #477

Closed donaldcampbelljr closed 3 months ago

donaldcampbelljr commented 3 months ago

Just continuing to merge down this work to the dev branch, see https://github.com/pepkit/looper/pull/472

donaldcampbelljr commented 3 months ago

This is failing pytest because we migrated to using a local instance of hello_looper that is pulled from github manually. Pytesting via Github actions cannot find the repository (because I gitignored the folder). Merging to dev for now. I will fix it there.

donaldcampbelljr commented 3 months ago

And I confirmed all tests pass locally in both this branch and dev branch before and after merge.