pepkit / peppy

Project metadata manager for PEPs in Python
https://pep.databio.org/peppy
BSD 2-Clause "Simplified" License
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nan value appearing in return of to_dict when project was initiated from pandas #422

Closed khoroshevskyi closed 1 year ago

khoroshevskyi commented 1 year ago

This issue already was solved #418 But it still appears, when project is initiated from pandas. e.g. using geofetch

a1 = Geofetcher().get_projects("GSE217424")["GSE217424_raw"]

aa1 = a1.to_dict(extended=True)["_sample_dict"]

aa1 has in dictionary values nan: image

Issue related to: https://github.com/pepkit/pepdbagent/issues/52