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perishky / dmrff

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load-epic-manifest.r error with SNPs #1

Closed perishky closed 5 years ago

perishky commented 5 years ago

In load-epic-manifest.r, semicolon separated SNPs results in NAs at the following line:

manifest$snp.exclude <- manifest$Name %in% with(manifest,Name[which(as.numeric(as.character(SNP_MinorAlleleFrequency))>0.01)])