Closed Lidija0710 closed 1 year ago
As the title states. When I run:
dmrs <- dmrff(estimate=test$estimate, se=test$se, p.value=test$p.value, methylation=methylation, chr=test$chr, pos=test$pos, maxgap=500, verbose=T)
the resulting dataframe does not contain a column called 'pos'. This is causing issues downstream when trying to create Manhattan plots.
Thanks!
I figured the issue out, it was me!
As the title states. When I run:
dmrs <- dmrff(estimate=test$estimate, se=test$se, p.value=test$p.value, methylation=methylation, chr=test$chr, pos=test$pos, maxgap=500, verbose=T)
the resulting dataframe does not contain a column called 'pos'. This is causing issues downstream when trying to create Manhattan plots.
Thanks!