perishky / meffil

Efficient algorithms for analyzing DNA methylation data.
Artistic License 2.0
55 stars 28 forks source link

fix sample sheet create columns #21

Open uxuelazkano opened 5 years ago

uxuelazkano commented 5 years ago

There is a problem when creating the sample sheet with the function create-samplesheet.r It creates two columns named sentrix_row and sentrix_col that after when using read-samplesheet.r do not work.

Lidija0710 commented 3 years ago

I am getting this error: "Error: $ operator is invalid for atomic vectors" when running this line: "pcs <- meffil.methylation.pcs(beta, verbose=T)"

what can I do to fix this?

perishky commented 3 years ago

This is due to a typo in a recent change I made. Just fixed this yesterday, so you should just be able to reinstall from github.


From: Lidija0710 @.> Sent: 16 November 2021 9:20 AM To: perishky/meffil @.> Cc: Subscribed @.***> Subject: Re: [perishky/meffil] fix sample sheet create columns (#21)

I am getting this error: "Error: $ operator is invalid for atomic vectors" when running this line: "pcs <- meffil.methylation.pcs(beta, verbose=T)"

what can I do to fix this?

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHubhttps://github.com/perishky/meffil/pull/21#issuecomment-970076938, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ACSRUULJKBD6XPNJ2ZLZOWTUMIO6XANCNFSM4JBPGYPA. Triage notifications on the go with GitHub Mobile for iOShttps://apps.apple.com/app/apple-store/id1477376905?ct=notification-email&mt=8&pt=524675 or Androidhttps://play.google.com/store/apps/details?id=com.github.android&referrer=utm_campaign%3Dnotification-email%26utm_medium%3Demail%26utm_source%3Dgithub.