perslab / CELLEX

CELLEX (CELL-type EXpression-specificity)
GNU General Public License v3.0
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Additional methods for gene filtering #22

Open pascaltimshel opened 4 years ago

pascaltimshel commented 4 years ago

Implement additional methods for gene filtering. The ANOVA model is relatively slow and other simple 'QC methods' must exist. The ANOVA model works best if data is normally distributed, which may not always be the case. Seek inspiration from established software, e.g. scanpy filter_genes