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peterjc / galaxy_blast

Galaxy wrappers for NCBI BLAST+ and related BLAST tools.
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Blastcmd adaptability #127

Closed Frahiriart closed 4 years ago

Frahiriart commented 4 years ago

Now with the tool blastdbcmd you can now use a blast database from history as an input of the tool

peterjc commented 4 years ago

Looks like things have moved on since I last did any work on this myself,

ERROR: Your Python version is: 2.7.15
Galaxy is currently supported on Python >=3.5 .
To run Galaxy, please install a supported Python version.
If a supported version is already installed but is not your default,
https://docs.galaxyproject.org/en/latest/admin/python.html contains instructions
on how to force Galaxy to use a different version.

We should tackle this first, on a separate pull request. It should be fairly straightforward...

nsoranzo commented 4 years ago

@peterjc It's actually already taken care of in https://github.com/peterjc/galaxy_blast/pull/123 .

Frahiriart commented 4 years ago

So i wait that the pull request #123 is added in master branch.

peterjc commented 4 years ago

Rebased version on #130, but this will need a bit more test coverage I think...

peterjc commented 4 years ago

Replaced by #130 which built on this, thank you.