Adding new ON130151.X Peronospora gaponenkoae to DB

peterjc / thapbi-pict

Tree Health and Plant Biosecurity Initiative - Phytophthora ITS1 Classifier Tool

https://thapbi-pict.readthedocs.io/

MIT License

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Adding new ON130151.X Peronospora gaponenkoae to DB #587

Closed peterjc closed 5 months ago

peterjc commented 5 months ago

Adding observed entry ON130151.X Peronospora gaponenkoae

This is a new sequence published 1 Jan 2024, and not yet in the NCBI taxonomy.

This appears (with the typical 32bp leader) in multiple samples.

It ought to be added via Oomycota_ITS1_obs.fasta next time our NCBI search results are refreshed, but there is something odd going today with multiple Phytophthora nicotianae not being returned by esearch/efetch.

peterjc commented 2 months ago

Looking back, the Phytophthora nicotianae issue could have been linked to it changing taxid from 4790 to 4792 as part of being merged with Phytophthora parasitica. See #594