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peterjc / thapbi-pict

Tree Health and Plant Biosecurity Initiative - Phytophthora ITS1 Classifier Tool
https://thapbi-pict.readthedocs.io/
MIT License
8 stars 2 forks source link

Fix cutadapt stdin failures on AppVeyor (Windows) #629

Closed peterjc closed 3 months ago

peterjc commented 3 months ago

This simply avoids using cutadapt with stdin, and thus closes #627.

It does not resolve the root cause of why stdin stopped working under AppVeyor (i.e. what changed), nor why it won't work for me with Python 3.12.4 on Windows 11 in local testing.