Add option to limit the number of columns in mismatch report

Add option --max-mismatch-report when we have a large number of user sequences

PR checklist

[ ] This comment contains a description of changes (with reason).
[ ] If you've fixed a bug or added code that should be tested, add tests!
- [ ] If you've added a new tool - add to the software_versions process and a regex to scrape_software_versions.py
- [ ] If you've added a new tool - have you followed the pipeline conventions in the contribution docs
- [ ] If necessary, also make a PR on the CFIA-NCFAD/nf-test-datasets repo
[ ] Make sure your code lints (nf-core lint .).
[ ] Ensure the test suite passes (nextflow run . -profile test,docker).
[ ] Usage Documentation in docs/usage.md is updated.
[ ] Output Documentation in docs/output.md is updated.
[ ] CHANGELOG.md is updated.
[ ] README.md is updated (including new tool citations and authors/contributors).