For classification of multiple samples with a large Centrifuge index, it may be much quicker to concatenate all reads for all samples together into a single set of inputs and sort out the results after prior to generation of Centrifuge Kraken-style reports and read filtering.
For classification of multiple samples with a large Centrifuge index, it may be much quicker to concatenate all reads for all samples together into a single set of inputs and sort out the results after prior to generation of Centrifuge Kraken-style reports and read filtering.