"Test run of ami-search-new for the release of ami-jars - ami20190221."

[ambarishK]

Status of the test run is successful.

It searches all specified terms and find cooccurrences.

Screenshot

ambarish123@ubuntu:~/Downloads/ami20190221/bin$ cd
ambarish123@ubuntu:~$ ami-search-new -p rice/ --dictionary country gene

Generic values (AMISearchTool)
================================
basename            null
cproject            /home/ambarish123/rice
ctree               
cTreeList           10 trees [rice/PMC6024620, rice/PMC6024883, rice/PMC6031371
dryrun              false
excludeBase         null
excludeTrees        null
file types          []
forceMake           false
includeBase         null
includeTrees        null
log4j               
logfile             null
verbose             0

Specific values (AMISearchTool)
================================
dictionaryList       [country, gene]
dictionaryTop        null
dictionarySuffix     [xml]
ignorePlugins        []

cProject: rice

running: word; word([frequencies])[{xpath:@count>20}, {w.stopwords:pmcstop.txt stopwords.txt}]...
running: search; search([country])[]...
running: gene; gene([human])[]0    [main] DEBUG org.contentmine.ami.dictionary.gene.HGNCDictionary  - is /org/contentmine/ami/plugins/gene/hgnc/hgnc.xml
...
create data tables
rrrr