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petersoapes / MacroResults

preliminary assessment of data from IA macro
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'cleaved piece' excluding some SC pieces #4

Closed petersoapes closed 7 years ago

petersoapes commented 7 years ago

In splineMeasure, the sc was selected, and name tested (this might not be nessecary), when the SC was a SC piece from Cleave function, the roiManager name was changed to 'NN cleaved piece'. It is missing the 'SC' that identifies all other SC pieces. The name can be manually changed in Roi manger to pass through the regex with SC.
Change the macro code to rename cleaved pieces with SC.

petersoapes commented 7 years ago

Fixed issue by renaming cleaved pieces to SC_cleaved_pieces