get better guessing or input of tuning parameters

petrelharp / context

Context-dependent mutation rate inference machinery.

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Closed petrelharp closed 9 years ago

petrelharp commented 10 years ago

namely, the parscale parameter for optim, and the stepsize parameter for mcmc.

petrelharp commented 9 years ago

mcmc-model.R now takes a config file that can specify these things.