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petrelharp
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ftprime_ms
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Update intro and tree sequence section.
#36
jeromekelleher
closed
6 years ago
1
Mention forwsim and anafits
#35
ashander
closed
6 years ago
1
Reorg benchmarks section; add simuPOP
#34
ashander
closed
6 years ago
1
Detail of c++/simupop implementations
#33
molpopgen
closed
6 years ago
16
Look at neutral vs arg timings
#32
ashander
closed
6 years ago
15
add in copy/paste of cpp results
#31
molpopgen
closed
6 years ago
3
Benchmarks section
#30
molpopgen
closed
6 years ago
6
add timing results from simuPOP
#29
molpopgen
closed
6 years ago
1
First pass at set-theoretical simplify.
#28
jeromekelleher
closed
6 years ago
11
merge methods and results; put benchmarks first
#27
petrelharp
closed
6 years ago
2
Edit pass
#26
jeromekelleher
closed
6 years ago
3
Forward sim overview
#25
molpopgen
closed
6 years ago
3
Alg w update
#24
jeromekelleher
closed
6 years ago
1
Algorithm style
#23
ashander
closed
6 years ago
1
High-ish level comments
#22
ashander
closed
6 years ago
10
Simplify perf
#21
jeromekelleher
closed
6 years ago
12
Figure showing simplify performance
#20
jeromekelleher
closed
6 years ago
15
overview of how things work using fwdpp
#19
molpopgen
closed
6 years ago
0
First pass at script to compute space complexity.
#18
jeromekelleher
closed
6 years ago
19
more of peter's edits
#17
petrelharp
closed
6 years ago
5
Review of forward time simulators needed
#16
jeromekelleher
closed
6 years ago
6
error in figure 1.
#15
jeromekelleher
closed
6 years ago
2
Peter's edits
#14
petrelharp
closed
6 years ago
3
we need a title
#13
petrelharp
closed
6 years ago
23
Various updates
#12
jeromekelleher
closed
6 years ago
0
Check output without selection against msprime and theory
#11
ashander
closed
6 years ago
64
Wf algorithm
#10
jeromekelleher
closed
6 years ago
3
Added asy source for rough version of diagram.
#9
jeromekelleher
closed
6 years ago
4
is it an ARG?
#8
petrelharp
closed
6 years ago
22
Progress on simulation benchmarks
#7
ashander
closed
6 years ago
8
Update for introduction & tree sequence presentation
#6
jeromekelleher
closed
6 years ago
8
Flagging: potential issues with large sims in simupop
#5
ashander
closed
6 years ago
8
problem_statement.tex missing?
#4
jeromekelleher
closed
6 years ago
1
role of neutral mutations in forward sim
#3
ashander
closed
6 years ago
4
Output format for sims
#2
ashander
closed
6 years ago
16
Add/benchmark simu pop
#1
ashander
closed
6 years ago
6
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