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petrelharp / lineage_plotting

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incorporate frequency cutoff when computing statistics #3

Closed petrelharp closed 2 years ago

petrelharp commented 2 years ago

The pipeline uses a global frequency cutoff, and it should be incorporated.

Note: one individual is sequenced at both low and high coverage; but only 1% of the SNPs are in error.

petrelharp commented 2 years ago

Wrong repository.