search

petrelharp / local_pca

Methods for examining PCA locally along the genome.
71 stars 13 forks source link

detect when data are not ACGT and give warning suggesting 'recode=FALSE' #2

Closed petrelharp closed 7 years ago

petrelharp commented 7 years ago

If the alleles are all 0/1, then returns NA unless recode=FALSE.

Perhaps this should be an option to vcf_windower.

petrelharp commented 7 years ago

694ef1776e9f8dc75752d531f9ba97159e0cb836Done in