petrelharp / treestats_ms

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add benchmarks #10

Closed molpopgen closed 5 years ago

molpopgen commented 5 years ago

Adds in the benchmarks. Only the "longer genome" plot contains the model fit for the timings.

@petrelharp @jeromekelleher I changed the fit function, as what Jerome had originally written down didn't seem quite right. Please take a look. I got a better fit for small sample sizes, but let's make sure it isn't nonsense.

jeromekelleher commented 5 years ago

Thanks for this @molpopgen, I'll merge and tweak the plots a bit and put them into the doc.