petteriTeikari / R-PLR

Once separate repos combined to one making it easier in the end
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Manual inspection of EMD #9

Closed ray-najjar closed 5 years ago

ray-najjar commented 5 years ago
DATA IN:  C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD 

Ray: should be TEST_OUT ?

Error given when trying to manually inspect the EMD

> runApp('Apps_Shiny/inspect_EMD')

Listening on http://127.0.0.1:7682
   --- just_the_file =  server.R 
   --- --- full_path_script =  C:/Users/User/Desktop/RPLR/R-PLR/Apps_Shiny/inspect_EMD/server.R 

DATA IN:  C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD
DATA OUT:  C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD/IMF_fusion
... moving done files to:  C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD/DONE 

Warning in server(...) :
  No input files were found from DATA IN = "C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD"
 .... There are no done files from your "check path" =  C:/Users/User/Desktop/RPLR/TEST_IN/recon_EMD/IMF_fusion 
        -> in other we assume now that you have not yet processed any of the input files
         EXPLANATION #2: Why we are checking from "Reconstructed path"? As that is the end point of this script

Warning in check.for.done.filecodes(files_fullpath, path_out) :
  There are no done files from your "input path"
  -> now we cannot processing anything now!!!
  .. found 0 unprocessed input files
Input file: NA 
Warning in server(...) :
  Well we have no input filename to open as no files were found from input path
Warning in file(file, "rt") :
  cannot open file 'NA': No such file or directory
Warning: Error in file: cannot open the connection
  50: file
  49: read.table
  48: read.csv
  47: server [C:\Users\User\Desktop\RPLR\R-PLR\Apps_Shiny\inspect_EMD/server.R#95]
Error in file(file, "rt") : cannot open the connection
petteriTeikari commented 5 years ago

Conflict yes, where the input data was read and this should now work