3rd Party Segmentors - Githubissues

petteriTeikari / minivess_mlops

Charissa Poon, Petteri Teikari et al. (2023): "A dataset of rodent cerebrovasculature from in vivo multiphoton fluorescence microscopy imaging", Scientific Data 10, 141 doi: 10.1038/s41597-023-02048-8

http://doi.org/10.1038/s41597-023-02048-8

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3rd Party Segmentors #4

Open petteriTeikari opened 1 year ago

petteriTeikari commented 1 year ago

Demonstrate how to use non-Monai segmentors with this pipeline, and run an actual experiment with these "for realz" that might or might not lead to a publication

e.g.

Butoi et al. 2023: "UniverSeg"
and some medical SAM variant like Lei et al. (2023): "MedLSAM: Localize and Segment Anything Model for 3D Medical Images"
One-shot Localization and Segmentation of Medical Images with Foundation Models, https://arxiv.org/abs/2310.18642

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