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pfmc-assessments / PacFIN.Utilities

R code to manipulate data from the PacFIN database for assessments
http://pfmc-assessments.github.io/PacFIN.Utilities
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Data request for shortspine thornyhead #88

Closed JaneSullivan-NOAA closed 1 year ago

JaneSullivan-NOAA commented 1 year ago

Identify the common name(s) or PacFIN species code(s)

For sure we want shortspine thornyhead catch GRND ROCK TRNY SSP1 NOM. SHORTSPINE THORNYHEA SEBASTOLOBUS SPP.
GRND ROCK TRNY SSPN SHORTSPINE THORNYHEAD SEBASTOLOBUS ALASCANUS

We may also want the rare species or grouped thornyhead catch GRND ROCK TRNY __THORNYHEADS COMPLEX SEBASTOLOBUS SPP.
GRND ROCK TRNY LSP1 NOM. LONGSPINE THORNYHEAD SEBASTOLOBUS SPP.
GRND ROCK TRNY LSPN LONGSPINE THORNYHEAD SEBASTOLOBUS ALTIVELIS
GRND ROCK TRNY THD1 NOM. THORNYHEADS SEBASTOLOBUS SPP.
GRND ROCK TRNY THDS THORNYHEADS (MIXED) SEBASTOLOBUS SPP.

Type of data needed

catch, biological data

Additional information

Landings Biological data (landings length compositions)

@chantelwetzel-noaa / @kellijohnson-NOAA this is for the assessment class. May want to route through @okenk, Owen, or Vlada. Thank you for your help!

Do you you have clearance to access these data?

chantelwetzel-noaa commented 1 year ago

I have pulled the species specific data from pacfin for SSPN. I have not had an opportunity to look into these other various species categories. I have posted these data in the shortspine thornyhead folder in the "2023 Assessment Cycle" folder on the network.

okenk commented 1 year ago

Thanks Chantel. I found them on the network and shared them with all students who have signed PacFIN relases via kiteworks.

JaneSullivan-NOAA commented 1 year ago

Thank you both!

chantelwetzel-noaa commented 1 year ago

@kellijohnson-NOAA FYI: I also checked for the "THDS" and "THD1". Only catch data was returned for the "THDS". This file was also posted to the network yesterday.

kellijohnson-NOAA commented 1 year ago

I did a quick search in the bds data for "thorny" in PACFIN_SPECIES_COMMON_NAME and the only PACFIN_SPECIES_CODEs that come up with records are LSP1, LSPN, THDS, SSPN. With respect to the catch data, there were also records for SSP1. I think @chantelwetzel-noaa has provided all of these.

@JaneSullivan-NOAA, if you could either close this issue or comment with respect to what we still haven't provided that would be super helpful.

JaneSullivan-NOAA commented 1 year ago

@kellijohnson-NOAA I think we are all set. Thanks for all your help!