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pfmc-assessments / VASTWestCoast

VAST for the NWFSC West Coast data
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check_TMB() #32

Closed chantelwetzel-noaa closed 3 years ago

chantelwetzel-noaa commented 3 years ago

Thanks for adding this function and I was finally able to confirm that my TMB is now working. However, just calling and running this function did not work on my machine. I received this error:

'system.file' is not an exported object from 'namespace:pkgload'

However, I was able run the code in check_TMB() by line replacing this line:

setwd(pkgload::system.file("examples", package = "TMB"))

and setting the working directory of my TMB example folder. I do have both devtools and pckload newly installed on my machine, so I am not entirely sure why the original line would not run. This issue may be specific to me and my machine but I am not certain and thought flagging this may be useful in case others have similar issues.

kellijohnson-NOAA commented 3 years ago

Thanks @chantelwetzel-noaa . I see my mistake, there are two versions of system.file(), one in base R and one in pkgload, where the latter is a replacement for the former. I have fixed the code, I think, with ec199fb.