Part 0: Chi-square = 1132.311982, (dof=1558) P = 1.000000
Composition homogeneity test using simulations.
P-values are shown.
Part Num 0
Part Name all
All Sequences Traceback (most recent call last):
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 93, in
main(args.paths, args.input_tree)
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 56, in main
do_one_partition(align, align_data, input_tree)
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 41, in do_one_partition
tree.compoTestUsingSimulations(nSims=1000, verbose=1)
File "/usr/local/src/p4-phylogenetics.git.cymon/p4/tree_fit.py", line 1005, in compoTestUsingSimulations
print(string.center('%6.4f' % partTaps[pNum], partWid), end=' ')
TypeError: float argument required, not list
Part 0: Chi-square = 1132.311982, (dof=1558) P = 1.000000 Composition homogeneity test using simulations. P-values are shown.
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 93, in
main(args.paths, args.input_tree)
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 56, in main
do_one_partition(align, align_data, input_tree)
File "/home/cymon/bin/calculateIfCompostionHomogeneous.py", line 41, in do_one_partition
tree.compoTestUsingSimulations(nSims=1000, verbose=1)
File "/usr/local/src/p4-phylogenetics.git.cymon/p4/tree_fit.py", line 1005, in compoTestUsingSimulations
print(string.center('%6.4f' % partTaps[pNum], partWid), end=' ')
TypeError: float argument required, not list