pgierz / esm_analysis

Other
1 stars 0 forks source link

File Lists in ECHAM still being used #5

Open pgierz opened 4 years ago

pgierz commented 4 years ago

Description

Lars was following the example for fldmean temp2 on Mistral. There seems to be a problem with the echam fldmean function call, it still wants file lists.

What I Did

This will generate a fldmean for: temp2
You passed in preferred_analysis_dir: None
WARNING:root:Oops: Trouble initializing or no analysis class available for: oasis3mct
ERROR:root:Error was: <class 'ModuleNotFoundError'>
WARNING:root:Oops: Trouble initializing or no analysis class available for: hdmodel
ERROR:root:Error was: <class 'ModuleNotFoundError'>
WARNING:root:Oops: Trouble initializing or no analysis class available for: esm_analysis.dkrz.log.02
ERROR:root:Error was: <class 'ModuleNotFoundError'>
WARNING:root:Oops: Trouble initializing or no analysis class available for: jsbach
ERROR:root:Error was: <class 'ModuleNotFoundError'>
WARNING:root:Oops: Trouble initializing or no analysis class available for: pism
ERROR:root:Error was: <class 'ModuleNotFoundError'>
Load 2d part of the grid in 2 second(s)
Traceback (most recent call last):
  File "/pf/a/a270124/.local/bin/esm_analysis", line 8, in <module>
    sys.exit(main())
  File "/sw/rhel6-x64/conda/anaconda3-bleeding_edge/lib/python3.6/site-packages/click/core.py", line 764, in __call__
    return self.main(*args, **kwargs)
  File "/sw/rhel6-x64/conda/anaconda3-bleeding_edge/lib/python3.6/site-packages/click/core.py", line 717, in main
    rv = self.invoke(ctx)
  File "/sw/rhel6-x64/conda/anaconda3-bleeding_edge/lib/python3.6/site-packages/click/core.py", line 1137, in invoke
    return _process_result(sub_ctx.command.invoke(sub_ctx))
  File "/sw/rhel6-x64/conda/anaconda3-bleeding_edge/lib/python3.6/site-packages/click/core.py", line 956, in invoke
    return ctx.invoke(self.callback, **ctx.params)
  File "/sw/rhel6-x64/conda/anaconda3-bleeding_edge/lib/python3.6/site-packages/click/core.py", line 555, in invoke
    return callback(*args, **kwargs)
  File "/pf/a/a270124/.local/lib/python3.6/site-packages/esm_analysis/cli.py", line 71, in fldmean
    analyzer.fldmean(varname)
  File "/pf/a/a270124/.local/lib/python3.6/site-packages/esm_analysis/esm_analysis.py", line 486, in fldmean
    return component.fldmean(varname)
TypeError: fldmean() missing 1 required positional argument: 'file_list'

The best way to get around this is to make sure file_list isn't used anywhere in any of the calls from the EsmAnalysis instance. Everything should just work with variable names; or ask questions if it gets stuck.