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phac-nml / irida-next

IRIDA Next
https://phac-nml.github.io/irida-next/
Apache License 2.0
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Automated Workflow Executions UI #585

Closed ericenns closed 2 months ago

ericenns commented 2 months ago

What does this PR do and why?

Describe in detail what your merge request does and why.

This PR adds in the UI for configuring automated workflow executions for a Project. Currently this includes listing, adding, and deleting of automated workflow executions.

Screenshots or screen recordings

Screenshots are required for UI changes, and strongly recommended for all other pull requests.

image

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How to set up and validate locally

Numbered steps to set up and validate the change are strongly suggested.

  1. Run server
  2. Navigate to a Project where you are Owner or Maintainer
  3. Click on Settings -> Automated Workflow Executions
  4. Click on Add new automated workflow execution
  5. Click on an automatable pipeline (if list is empty ensure that your config/pipelines/pipelines.json has at least one pipeline version with "automatable": true, refer to default file in repo)
  6. Click on Update samples with analysis results and Receive an email notification when your analysis has completed?
  7. Click on Submit
  8. Add a new Sample to the Project
  9. Upload pair end data to the new Sample
  10. Wait for workflow execution to be ran and confirm that files and metadata have been added to the Sample

PR acceptance checklist

This checklist encourages us to confirm any changes have been analyzed to reduce risks in quality, performance, reliability, security, and maintainability.

github-actions[bot] commented 2 months ago

Simplecov Report

Covered Threshold
92.32% 90%