phac-nml irida-wf-ga2xml issues

phac-nml / irida-wf-ga2xml

Create an IRIDA workflow from a Galaxy workflow file

Apache License 2.0

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update changelog for release

#22 JeffreyThiessen closed 2 years ago
0
Replace workflow name in .ga output

#21 dfornika closed 2 years ago
1
bump version to 1.2.0 for release

#20 JeffreyThiessen closed 3 years ago
0
Be more flexible in finding reference data, update to match current Galaxy .ga format

#19 pvanheus closed 3 years ago
6
GitHub actions

#18 JeffreyThiessen closed 3 years ago
0
GitHub actions

#17 JeffreyThiessen closed 3 years ago
1
fixed workflow id not generating uuid when -I is not used

#16 JeffreyThiessen closed 4 years ago
0
The <id> field is not filled in automatically

#15 apetkau closed 4 years ago
0
Add README info on how to build standalone JAR from source for release

#14 peterk87 closed 4 years ago
3
The sequenceReadsPaired or sequenceReads is not filled out in <inputs>

#13 apetkau closed 4 years ago
1
irida_workflow.xml now uses uuid for toolParameter toolId

#12 JeffreyThiessen closed 4 years ago
2
Pretty print workflow

#11 dfornika closed 4 years ago
1
Add UUID CLI parameter

#10 dfornika closed 4 years ago
1
Add default message for workflow.label.share-analysis-samples

#9 dfornika closed 4 years ago
0
messages.properties file doesn't include 'workflow.label.share-analysis-samples'

#8 dfornika closed 4 years ago
0
Pretty print Galaxy .ga file when constructing directory of files for IRIDA

#7 apetkau closed 4 years ago
1
uuid

#6 happykhan closed 4 years ago
1
both Galaxy. ga output and xml should have the name.

#5 happykhan closed 2 years ago
1
does not accept galaxy 18 ga file.

#4 happykhan closed 3 years ago
9
IRIDA compatible directory output with messages_en.properties and proper filenames

#3 peterk87 closed 6 years ago
12
Detect if a tool parameter has a limited set of choices

#2 peterk87 opened 6 years ago
0
Generate template messages.properties for Galaxy workflow pulling parameter descriptions from Galaxy tool XMLs

#1 peterk87 closed 6 years ago
1