Using the bionumerics E. coli database and the genome assembly GCA_032362635 took more than three hours and 121 Gb of memory. This needs to be investigated and determined what is the issue. Normal run time is ~10 mins for other genomes with the same scheme. The genome has correct characteristics in terms of size and other features compared to others. There were others as well that took a long time to finish, so it is worth investigating where the slow down and high memory use are coming from.
Using the bionumerics E. coli database and the genome assembly GCA_032362635 took more than three hours and 121 Gb of memory. This needs to be investigated and determined what is the issue. Normal run time is ~10 mins for other genomes with the same scheme. The genome has correct characteristics in terms of size and other features compared to others. There were others as well that took a long time to finish, so it is worth investigating where the slow down and high memory use are coming from.