Hi!
Can it be possible to run batch of samples in mob_recon, then share command line for this run as i tried many possible ways like run command line in folder specific to fasta files but it does not work. Moreover the output results for plasmid fasta is specific plasmid number but not sample ID attached with plasmid number,
following command line for single fasta file
mob_recon --infile assembly.fasta --outdir my_out_dir
Hi! Can it be possible to run batch of samples in mob_recon, then share command line for this run as i tried many possible ways like run command line in folder specific to fasta files but it does not work. Moreover the output results for plasmid fasta is specific plasmid number but not sample ID attached with plasmid number, following command line for single fasta file mob_recon --infile assembly.fasta --outdir my_out_dir
Thank You Firdoos