search

phac-nml / staramr

Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.
Apache License 2.0
111 stars 25 forks source link

Changing Sensitive to Susceptible in Outputs #183

Closed emarinier closed 11 months ago

emarinier commented 11 months ago

Address #164.

Also note this change (sensitive to susceptible in the help text), which I thought was appropriate, but may be wrong:

        report_group.add_argument('--exclude-negatives', action='store_true', dest='exclude_negatives',
                                  help='Exclude negative results (those susceptible to antimicrobials) [False].',
emarinier commented 11 months ago

This all looks great to me, including the help text change.

Could you add something in CHANGELOG.md about this?

Updated