Look into optimizing the running of MLST

phac-nml / staramr

Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.

Apache License 2.0

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Look into optimizing the running of MLST #81

Closed apetkau closed 5 years ago

apetkau commented 5 years ago

We are currently using --threads in the mlst program, but this may not be the fastest way. Look at running separate mlst instances instead of using the --threads parameter.

apetkau commented 5 years ago

This is now fixed in #85