Map the MLST scheme to an organism name

phac-nml / staramr

Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.

Apache License 2.0

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Map the MLST scheme to an organism name #83

Closed apetkau closed 5 years ago

apetkau commented 5 years ago

Map the MLST scheme to an organism name. So, we would go from senterica to Salmonella enterica.

apetkau commented 5 years ago

After some discussion it was decided to not use MLST for organism detection since we don't want to restrict ourselves to only organisms that have MLST schemes.