pharmaR / regulatory-r-repo-wg

Package consensus for regulated industries
https://pharmar.github.io/regulatory-r-repo-wg
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team meeting (2023-08-24) #56

Closed Crosita closed 4 months ago

Crosita commented 11 months ago

Agenda

Design thinking workshop Agree on our liberties/assumptions:

  1. golden image
  2. support any packages OR solve only particular use case
  3. ??

Workshop attendees Kevin Doug Andrew Coline Wilmar Stefan Lars Yann Matthias Nicholas Jessica?

Crosita commented 11 months ago

@kkmann @dgkf @borgmaan @Stefan-Doering-BI @Xyarz @nicholas-masel please share the liberties/assumptions our working group should be making going forward. Ie, things we won't question going forward. Two examples are given in my comment above.

matthiazzz commented 10 months ago

"Golden Image" question: I assume one of the many Rocker containers might serve well as an initial starting point? I assume the bare essential rocker/r-ver would serve the needs as it has "an emphasis on reproducibility" when compared to r-base.

However, my understanding is that (many) companies deploy from fully customized docker files and scripts and/or use other virtualization environments like Apptainer (formerly known as Singularity).

But given the popularity and simplicity of docker and using a readily available, well-known base build like rocker/r-ver seems the way to go.

Some questions from my side remain: